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tutorialgcskewjapanese [2007/10/22 23:37]
gaou
tutorialgcskewjapanese [2007/10/22 23:40]
gaou
Line 172: Line 172:
  
    use G;     use G; 
-   $gb = new G("​ecoli.gbk"​); ​+   $gb = new G("​ecoli"​); ​
    ​cai($gb); ​    ​cai($gb); ​
    ​$w_val = w_value($gb); ​    ​$w_val = w_value($gb); ​
Line 182: Line 182:
       if ($w_second < 0.5 && $cai > 0.8){        if ($w_second < 0.5 && $cai > 0.8){ 
          ​$afterstart = $gb->​after_startcodon($cds,​ 99);           ​$afterstart = $gb->​after_startcodon($cds,​ 99); 
-         ​gcskew(\$afterstart,​ -window=>​9,​ -filename=>"​$cds-gcskew.gif"​); ​+         ​gcskew($afterstart,​ -window=>​9,​ -filename=>"​$cds-gcskew.gif"​); ​
       }        } 
     }      } 
tutorialgcskewjapanese.txt ยท Last modified: 2014/01/18 07:44 (external edit)