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soap [2010/04/05 11:30]
admin
soap [2014/01/18 07:44] (current)
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    * All processes basically take two sets of arguments: **in0** corresponding to sequence file (format is automatically interpreted,​ can be FASTA, FASTQ, GenBank, EMBL, SWISS, and etc.)    * All processes basically take two sets of arguments: **in0** corresponding to sequence file (format is automatically interpreted,​ can be FASTA, FASTQ, GenBank, EMBL, SWISS, and etc.)
    * Second argument **param** is a list of optional parameters.    * Second argument **param** is a list of optional parameters.
 +
 +
 +== Publication ==
 +  * "​G-language genome analysis environment with REST and SOAP web service interfaces",​ Arakawa K, Kido N, Oshita K, Tomita M, //Nucleic Acids Res.//, 2010, 38 Suppl:​W700-705 ([[http://​www.ncbi.nlm.nih.gov/​pubmed/​20439313|PubMed]]).
 +
  
 ===== Usage examples in different programming languages ===== ===== Usage examples in different programming languages =====
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 print serv.gcskew('​ecoli',​param) print serv.gcskew('​ecoli',​param)
 </​code>​ </​code>​
-===== MyExperiment ​and Taverna =====+===== myExperiment ​and Taverna =====
  
 SOAP Services can be easily used from graphical user interfaces using workflow management software such as [[http://​taverna.sourceforge.net/​|Taverna Workbench]]. Example workflows (currently 9 available) can be found at the [[http://​www.myexperiment.org/​search?​query=g-language&​type=all|the myExperiment site]]. SOAP Services can be easily used from graphical user interfaces using workflow management software such as [[http://​taverna.sourceforge.net/​|Taverna Workbench]]. Example workflows (currently 9 available) can be found at the [[http://​www.myexperiment.org/​search?​query=g-language&​type=all|the myExperiment site]].
  
 {{:​pict5.gif?​600|Example Workflow in Taverna workbench}} {{:​pict5.gif?​600|Example Workflow in Taverna workbench}}
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