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kbws_readme [2013/03/08 09:02]
cory [Installation]
kbws_readme [2014/01/18 07:44] (current)
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 === DATABASE DEFINITION === === DATABASE DEFINITION ===
-The database definitions for following commands are available at "​KBWS-1.0.8/​data/​embossrc-template"​. ​+The database definitions for following commands are available at "​KBWS-1.0.9/​data/​embossrc-template"​. ​
  
 The latest version is available at following URL: The latest version is available at following URL:
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       Search similar sequences in public repositories using BLAST       Search similar sequences in public repositories using BLAST
       Output file [foxp2_human.kblast]:​       Output file [foxp2_human.kblast]:​
-      Jobid: kbws_4981686 
-      ****** 
       ​       ​
       % cat foxp2_human.kblast       % cat foxp2_human.kblast
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       RNA 2D structure prediction from an RNA sequence using CentroidFold       RNA 2D structure prediction from an RNA sequence using CentroidFold
       Input (gapped) sequence(s):​ dna.fasta       Input (gapped) sequence(s):​ dna.fasta
 +      Output image file name [kcentroidfold.png]:​
       Output file [fasta.centroidfold]:​       Output file [fasta.centroidfold]:​
-      Jobid: 13401346 + 
-      ​*********** +      ​% ls kcentroidfold.png 
-      ​http://​soap.g-language.org/​result/​13401346.png+      ​kcentroidfold.png
       ​       ​
       % cat fasta.centroidfold       % cat fasta.centroidfold
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    % kweblogo dna.m-fasta    % kweblogo dna.m-fasta
    make the generation of sequence logos using WebLogo    make the generation of sequence logos using WebLogo
-   Jobid3203930 +   Output file name [kweblogo.png]
-   ** +    
-   http://soap.g-language.org/​alis/​result/​3203930.png+   % ls kweblogo.png 
 +   ​kweblogo.png
  
 === Sample data === === Sample data ===
kbws_readme.txt · Last modified: 2014/01/18 07:44 (external edit)